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1

Discontinuous molecular dynamics for semiflexible and rigid bodies

Hernández de la Peña, Lisandro, van Zon, Ramses, Schofield, Jeremy, Opps, Sheldon B.

Journal:

The Journal of Chemical Physics

Année:

2007

Langue:

english

Fichier:

PDF, 183 KB

english, 2007

2

Stationary state fluctuation theorems for driven Langevin systems

E.G.D. Cohen, Ramses van Zon

Journal:

Comptes Rendus Physique

Année:

2007

Langue:

english

Fichier:

PDF, 192 KB

english, 2007

3

Short-time fluctuations of displacements and work

Ramses van Zon, S.S. Ashwin, E.G.D. Cohen

Journal:

Comptes Rendus Physique

Année:

2007

Fichier:

PDF, 264 KB

2007

4

Numerical implementation of the exact dynamics of free rigid bodies

Ramses van Zon, Jeremy Schofield

Journal:

Journal of Computational Physics

Année:

2007

Langue:

english

Fichier:

PDF, 352 KB

english, 2007

5

Quantum free-energy differences from nonequilibrium path integrals. I. Methods and numerical application

van Zon, Ramses, Hernández de la Peña, Lisandro, Peslherbe, Gilles H., Schofield, Jeremy

Journal:

Physical Review E

Année:

2008

Langue:

english

Fichier:

PDF, 223 KB

english, 2008

6

Quantum free-energy differences from nonequilibrium path integrals. II. Convergence properties for the harmonic oscillator

van Zon, Ramses, Hernández de la Peña, Lisandro, Peslherbe, Gilles H., Schofield, Jeremy

Journal:

Physical Review E

Année:

2008

Langue:

english

Fichier:

PDF, 265 KB

english, 2008

7

Constructing smooth potentials of mean force, radial distribution functions, and probability densities from sampled data

van Zon, Ramses, Schofield, Jeremy

Journal:

The Journal of Chemical Physics

Année:

2010

Langue:

english

Fichier:

PDF, 644 KB

english, 2010

8

Effective pair potentials for spherical nanoparticles

van Zon, Ramses

Journal:

Journal of Statistical Mechanics Theory and Experiment

Année:

2009

Langue:

english

Fichier:

PDF, 656 KB

english, 2009

9

Mode-Coupling Theory for Multiple-Time Correlation Functions of Tagged Particle Densities and Dynamical Filters Designed for Glassy Systems †

van Zon, Ramses, Schofield, Jeremy

Journal:

Journal of Physical Chemistry B

Année:

2005

Langue:

english

Fichier:

PDF, 152 KB

english, 2005

10

Pairing of Lyapunov exponents for a hard-sphere gas under shear in the thermodynamic limit

Panja, Debabrata, van Zon, Ramses

Journal:

Physical Review E

Année:

2002

Langue:

english

Fichier:

PDF, 158 KB

english, 2002

11

Symplectic algorithms for simulations of rigid-body systems using the exact solution of free motion

van Zon, Ramses, Schofield, Jeremy

Journal:

Physical Review E

Année:

2007

Langue:

english

Fichier:

PDF, 99 KB

english, 2007

12

Glassy dynamics and domains: Explicit results for the East model

van Zon, Ramses, Schofield, Jeremy

Journal:

The Journal of Chemical Physics

Année:

2005

Langue:

english

Fichier:

PDF, 693 KB

english, 2005

13

Lyapunov exponent pairing for a thermostatted hard-sphere gas under shear in the thermodynamic limit

Panja, Debabrata, van Zon, Ramses

Journal:

Physical Review E

Année:

2002

Langue:

english

Fichier:

PDF, 61 KB

english, 2002

14

Multiple-point and multiple-time correlation functions in a hard-sphere fluid

van Zon, Ramses, Schofield, Jeremy

Journal:

Physical Review E

Année:

2001

Langue:

english

Fichier:

PDF, 173 KB

english, 2001

15

Mode-coupling theory for multiple-point and multiple-time correlation functions

van Zon, Ramses, Schofield, Jeremy

Journal:

Physical Review E

Année:

2001

Langue:

english

Fichier:

PDF, 212 KB

english, 2001

16

Free energy landscape of protein-like chains with discontinuous potentials

Movahed, Hanif Bayat, van Zon, Ramses, Schofield, Jeremy

Journal:

The Journal of Chemical Physics

Année:

2012

Langue:

english

Fichier:

PDF, 725 KB

english, 2012

17

Gaussian approximation to single particle correlations at and below the picosecond scale for Lennard-Jones and nanoparticle fluids

van Zon, Ramses, Ashwin, S S, Cohen, E G D

Journal:

Année:

2008

Langue:

english

Fichier:

PDF, 232 KB

english, 2008

18

Event-driven dynamics of rigid bodies interacting via discretized potentials

van Zon, Ramses, Schofield, Jeremy

Journal:

The Journal of Chemical Physics

Année:

2008

Langue:

english

Fichier:

PDF, 889 KB

english, 2008

19

Discontinuous molecular dynamics for rigid bodies: Applications

Hernández de la Peña, Lisandro, van Zon, Ramses, Schofield, Jeremy, Opps, Sheldon B.

Journal:

The Journal of Chemical Physics

Année:

2007

Langue:

english

Fichier:

PDF, 180 KB

english, 2007

20

Efficient algorithms for rigid body integration using optimized splitting methods and exact free rotational motion

van Zon, Ramses, Omelyan, Igor P., Schofield, Jeremy

Journal:

The Journal of Chemical Physics

Année:

2008

Langue:

english

Fichier:

PDF, 508 KB

english, 2008

21

Mapping quantum-classical Liouville equation: Projectors and trajectories

Kelly, Aaron, van Zon, Ramses, Schofield, Jeremy, Kapral, Raymond

Journal:

The Journal of Chemical Physics

Année:

2012

Langue:

english

Fichier:

PDF, 486 KB

english, 2012

22

[ACM Press the Practice and Experience in Advanced Research Computing - Chicago, IL, USA (2019.07.28-2019.08.01)] Proceedings of the Practice and Experience in Advanced Research Computing on Rise of the Machines (learning) - PEARC '19 - Deploying a Top-100 Supercomputer for Large Parallel Workloads

Ponce, Marcelo, Mundim, Bruno C., Nolta, Mike, Pinto, Jaime, Saldarriaga, Marco, Slavnic, Vladimir, Spence, Erik, Yu, Ching-Hsing, Peltier, W. Richard, van Zon, Ramses, Northrup, Scott, Gruner, Daniel

Année:

2019

Langue:

english

Fichier:

PDF, 8.46 MB

english, 2019

23

[ACM Press the Practice and Experience in Advanced Research Computing - Chicago, IL, USA (2019.07.28-2019.08.01)] Proceedings of the Practice and Experience in Advanced Research Computing on Rise of the Machines (learning) - PEARC '19 - Software-Enhanced Teaching and Visualization Capabilities of an Ultra-High-Resolution Video Wall

van Zon, Ramses, Ponce, Marcelo

Année:

2019

Langue:

english

Fichier:

PDF, 2.67 MB

english, 2019